LUCAT1 lung cancer associated transcript 1

Information
Symbol
LUCAT1
Type
ncRNA
Description
lung cancer associated transcript 1
Entrez Gene ID
100505994
Genome
hg19
Position
chr5:90,606,444-90,610,225
Genome
hg38
Position
chr5:91,310,627-91,314,408
MIM
618190 OMIM
HGNC
HGNC:48498 HGNC
Ensembl
ENSG00000248323 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM SCAL1
SYNONYM SCAT5
MIM 618190 OMIM
HGNC HGNC:48498 HGNC
Ensembl ENSG00000248323 Ensembl
AllianceGenome HGNC:48498
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000650047.1 hg38 chr5 91,307,679 91,312,375 4,697
ENST00000648811.1 hg38 chr5 91,310,627 91,314,402 3,776
ENST00000513626.3 hg38 chr5 91,310,627 91,314,408 3,782
ENST00000648822.1 hg38 chr5 91,218,365 91,314,375 96,011
ENST00000650583.1 hg38 chr5 91,302,731 91,314,252 11,522
ENST00000648385.1 hg38 chr5 91,181,388 91,314,306 132,919
ENST00000648310.1 hg38 chr5 91,302,733 91,314,386 11,654
ENST00000649969.1 hg38 chr5 91,302,731 91,314,402 11,672
ENST00000649976.1 hg38 chr5 91,312,769 91,314,371 1,603
ENST00000650004.1 hg38 chr5 91,151,238 91,314,402 163,165
ENST00000650008.1 hg38 chr5 91,310,641 91,313,675 3,035
ENST00000647761.1 hg38 chr5 91,283,911 91,314,386 30,476
ENST00000650047.1 hg19 chr5 90,603,496 90,608,192 4,697
ENST00000648811.1 hg19 chr5 90,606,444 90,610,219 3,776
ENST00000513626.3 hg19 chr5 90,606,444 90,610,225 3,782
ENST00000650008.1 hg19 chr5 90,606,458 90,609,492 3,035
ENST00000649976.1 hg19 chr5 90,608,586 90,610,188 1,603
ENST00000647761.1 hg19 chr5 90,579,728 90,610,203 30,476
ENST00000648310.1 hg19 chr5 90,598,550 90,610,203 11,654
ENST00000648385.1 hg19 chr5 90,477,205 90,610,123 132,919
ENST00000648822.1 hg19 chr5 90,514,182 90,610,192 96,011
ENST00000650004.1 hg19 chr5 90,447,055 90,610,219 163,165
ENST00000649969.1 hg19 chr5 90,598,548 90,610,219 11,672
ENST00000650583.1 hg19 chr5 90,598,548 90,610,069 11,522
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