APTR Alu-mediated CDKN1A/p21 transcriptional regulator
Information
- Symbol
- APTR
- Type
- ncRNA
- Description
- Alu-mediated CDKN1A/p21 transcriptional regulator
- Entrez Gene ID
- 100505854
- Genome
- hg19
- Position
- chr7:77,310,898-77,325,594
- Genome
- hg38
- Position
- chr7:77,681,581-77,696,277
- MIM
- 616048 OMIM
- HGNC
- HGNC:44173 HGNC
- Ensembl
- ENSG00000214293 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
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0 |
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | RSBN1L-AS1 |
| MIM | 616048 OMIM |
| HGNC | HGNC:44173 HGNC |
| Ensembl | ENSG00000214293 Ensembl |
| AllianceGenome | HGNC:44173 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000659053.1 | hg38 | chr7 | 77,657,659 | 77,696,255 | 38,597 |
| ENST00000654794.2 | hg38 | chr7 | 77,681,581 | 77,696,277 | 14,697 |
| ENST00000687850.2 | hg38 | chr7 | 77,683,830 | 77,696,268 | 12,439 |
| ENST00000664660.1 | hg38 | chr7 | 77,657,733 | 77,696,267 | 38,535 |
| ENST00000659053.1 | hg19 | chr7 | 77,286,976 | 77,325,572 | 38,597 |
| ENST00000664660.1 | hg19 | chr7 | 77,287,050 | 77,325,584 | 38,535 |
| ENST00000654794.2 | hg19 | chr7 | 77,310,898 | 77,325,594 | 14,697 |
| ENST00000687850.2 | hg19 | chr7 | 77,313,147 | 77,325,585 | 12,439 |
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