LINC00578 long intergenic non-protein coding RNA 578
Information
- Symbol
- LINC00578
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 578
- Entrez Gene ID
- 100505566
- Genome
- hg19
- Position
- chr3:177,439,958-177,472,772
- Genome
- hg38
- Position
- chr3:177,722,170-177,754,984
- HGNC
- HGNC:43807 HGNC
- Ensembl
- ENSG00000228221 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely pathogenic | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000656037.1 | hg38 | chr3 | 177,441,927 | 177,767,379 | 325,453 |
| ENST00000661450.1 | hg38 | chr3 | 177,441,971 | 177,752,691 | 310,721 |
| ENST00000668730.1 | hg38 | chr3 | 177,722,170 | 177,754,984 | 32,815 |
| ENST00000656037.1 | hg19 | chr3 | 177,159,715 | 177,485,167 | 325,453 |
| ENST00000661450.1 | hg19 | chr3 | 177,159,759 | 177,470,479 | 310,721 |
| ENST00000668730.1 | hg19 | chr3 | 177,439,958 | 177,472,772 | 32,815 |
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