GATA6-AS1 GATA6 antisense RNA 1 (head to head)
Information
- Symbol
- GATA6-AS1
- Type
- ncRNA
- Description
- GATA6 antisense RNA 1 (head to head)
- Entrez Gene ID
- 100128893
- Genome
- hg19
- Position
- chr18:19,746,859-19,748,929
- Genome
- hg38
- Position
- chr18:22,166,898-22,168,968
- HGNC
- HGNC:48840 HGNC
- Ensembl
- ENSG00000266010 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | BM742401 |
| SYNONYM | locus5689 |
| HGNC | HGNC:48840 HGNC |
| Ensembl | ENSG00000266010 Ensembl |
| AllianceGenome | HGNC:48840 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000701458.1 | hg38 | chr18 | 22,166,914 | 22,168,385 | 1,472 |
| ENST00000650323.1 | hg38 | chr18 | 22,167,734 | 22,169,878 | 2,145 |
| ENST00000583490.1 | hg38 | chr18 | 22,166,898 | 22,168,968 | 2,071 |
| ENST00000579431.3 | hg38 | chr18 | 22,166,891 | 22,168,553 | 1,663 |
| ENST00000649729.3 | hg38 | chr18 | 22,166,894 | 22,168,466 | 1,573 |
| ENST00000579431.3 | hg19 | chr18 | 19,746,852 | 19,748,514 | 1,663 |
| ENST00000649729.3 | hg19 | chr18 | 19,746,855 | 19,748,427 | 1,573 |
| ENST00000583490.1 | hg19 | chr18 | 19,746,859 | 19,748,929 | 2,071 |
| ENST00000701458.1 | hg19 | chr18 | 19,746,875 | 19,748,346 | 1,472 |
| ENST00000650323.1 | hg19 | chr18 | 19,747,695 | 19,749,839 | 2,145 |
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