Annotation Detail

Information
Associated Genes
APEX1
Associated Variants
MDM2 p.Glu360= (p.E360=) ( ENST00000393412.7, ENST00000393413.7, ENST00000360430.6, ENST00000517852.5, ENST00000258148.11, ENST00000258149.11, ENST00000544561.6, ENST00000299252.8, ENST00000350057.9, ENST00000539479.6, ENST00000545204.2, ENST00000393410.5, ENST00000393416.7 )
APEX1 p.Asp148Glu (p.D148E) ( ENST00000557054.1, ENST00000398030.8, ENST00000216714.8, ENST00000555414.5 )
APEX1 p.Asp148Glu (p.D148E) ( ENST00000555414.5, ENST00000216714.8, ENST00000557054.1, ENST00000398030.8 )
RPAP1 c.541+55G>A ( ENST00000304330.9, ENST00000561603.5 )
MLH1 p.Ile219Leu (p.I219L) ( ENST00000231790.8, ENST00000435176.5, ENST00000441265.6, ENST00000450420.6, ENST00000455445.6, ENST00000456676.7, ENST00000458205.6, ENST00000466900.6, ENST00000485889.2, ENST00000492474.6, ENST00000536378.5, ENST00000539477.6, ENST00000616768.6, ENST00000673673.2, ENST00000673715.1, ENST00000673899.1, ENST00000673990.2, ENST00000674019.1, ENST00000713802.1 )
MLH1 p.Ile219Val (p.I219V) ( ENST00000458205.6, ENST00000539477.6, ENST00000456676.7, ENST00000455445.6, ENST00000485889.2, ENST00000536378.5, ENST00000231790.8, ENST00000435176.5, ENST00000441265.6, ENST00000492474.6, ENST00000466900.6, ENST00000674019.1, ENST00000713802.1, ENST00000450420.6, ENST00000616768.6, ENST00000673673.2, ENST00000673715.1, ENST00000673899.1, ENST00000673990.2 )
MDM2 p.Glu360= (p.E360=) ( ENST00000258148.11, ENST00000258149.11, ENST00000299252.8, ENST00000350057.9, ENST00000360430.6, ENST00000393410.5, ENST00000393412.7, ENST00000393413.7, ENST00000393416.7, ENST00000517852.5, ENST00000539479.6, ENST00000544561.6, ENST00000545204.2 )
APEX1 p.Asp148Glu (p.D148E) ( ENST00000216714.8, ENST00000398030.8, ENST00000555414.5, ENST00000557054.1 )
APEX1 p.Asp148Glu (p.D148E) ( ENST00000216714.8, ENST00000398030.8, ENST00000555414.5, ENST00000557054.1 )
RPAP1 c.541+55G>A ( ENST00000304330.9, ENST00000561603.5 )
MLH1 p.Ile219Leu (p.I219L) ( ENST00000231790.8, ENST00000435176.5, ENST00000441265.6, ENST00000450420.6, ENST00000455445.6, ENST00000456676.7, ENST00000458205.6, ENST00000466900.6, ENST00000485889.2, ENST00000492474.6, ENST00000536378.5, ENST00000539477.6, ENST00000616768.6, ENST00000673673.2, ENST00000673715.1, ENST00000673899.1, ENST00000673990.2, ENST00000674019.1, ENST00000713802.1 )
MLH1 p.Ile219Val (p.I219V) ( ENST00000231790.8, ENST00000435176.5, ENST00000441265.6, ENST00000450420.6, ENST00000455445.6, ENST00000456676.7, ENST00000458205.6, ENST00000466900.6, ENST00000485889.2, ENST00000492474.6, ENST00000536378.5, ENST00000539477.6, ENST00000616768.6, ENST00000673673.2, ENST00000673715.1, ENST00000673899.1, ENST00000673990.2, ENST00000674019.1, ENST00000713802.1 )
Associated Disease
Malignant neoplasm of breast
Source Database
DisGeNET
Description
We observed two two-way SNP-SNP interactions (APEX1-rs1130409 and RPAP1-rs2297381; MLH1-rs1799977 and MDM2-rs769412) in logistic regression that conferred elevated risks for breast cancer (P(interaction)<7.3 × 10(-3)).
Pubmed
23755158
Original source reporting the Gene Disease association
BeFree
DisGENET score for the Gene Disease association
0.0188167036969773
Year of publication
2013
Drugs