Annotation Detail

Information
Associated Genes
FTO
Associated Variants
FTO c.46-30685T>G ( ENST00000636218.1, ENST00000636491.1, ENST00000637001.1, ENST00000637969.1, ENST00000471389.6 )
FTO c.124-4485A>T ( ENST00000471389.6, ENST00000637001.1, ENST00000637969.1, ENST00000636218.1, ENST00000636491.1 )
FTO c.46-30685T>G ( ENST00000471389.6, ENST00000636218.1, ENST00000636491.1, ENST00000637001.1, ENST00000637969.1 )
FTO c.124-4485A>T ( ENST00000471389.6, ENST00000636218.1, ENST00000636491.1, ENST00000637001.1, ENST00000637969.1 )
Associated Disease
Malignant neoplasm of breast
Source Database
DisGeNET
Description
SNPs at four loci, 1q32.1 (MDM4, P = 2.1 × 10(-12) and LGR6, P = 1.4 × 10(-8)), 2p24.1 (P = 4.6 × 10(-8)) and 16q12.2 (FTO, P = 4.0 × 10(-8)), were associated with ER-negative but not ER-positive breast cancer (P > 0.05).
Pubmed
23535733
Original source reporting the Gene Disease association
GWASCAT
DisGENET score for the Gene Disease association
0.121900093104562
Year of publication
2013
Drugs