Annotation Detail

Information
Associated Genes
RNF146
Associated Variants
LSP1 c.*13+200T>C ( ENST00000381775.5, ENST00000311604.8, ENST00000612798.4, ENST00000405957.6, ENST00000406638.6 )
COL1A1 c.804+80A>C ( ENST00000225964.10 )
rs2180341 ( ENST00000608991.5 )
LSP1 c.*13+200T>C ( ENST00000311604.8, ENST00000381775.5, ENST00000405957.6, ENST00000406638.6, ENST00000612798.4 )
COL1A1 c.804+80A>C ( ENST00000225964.10 )
rs2180341 ( ENST00000608991.5 )
Associated Disease
Malignant neoplasm of breast
Source Database
DisGeNET
Description
Three SNPs (LSP1-rs3817198, COL1A1-rs2075555, and RNF146-rs2180341) did not show association with breast cancer risk.
Pubmed
21791674
Original source reporting the Gene Disease association
BeFree
DisGENET score for the Gene Disease association
0.123181357594843
Year of publication
2011
Drugs