Annotation Detail

Information
Associated Genes
LSP1
Associated Variants
LSP1 c.*13+200T>C ( ENST00000381775.5, ENST00000311604.8, ENST00000612798.4, ENST00000405957.6, ENST00000406638.6 )
COL1A1 c.804+80A>C ( ENST00000225964.10 )
rs2180341 ( ENST00000608991.5 )
LSP1 c.*13+200T>C ( ENST00000311604.8, ENST00000381775.5, ENST00000405957.6, ENST00000406638.6, ENST00000612798.4 )
COL1A1 c.804+80A>C ( ENST00000225964.10 )
rs2180341 ( ENST00000608991.5 )
Associated Disease
Malignant neoplasm of breast
Source Database
DisGeNET
Description
Three SNPs (LSP1-rs3817198, COL1A1-rs2075555, and RNF146-rs2180341) did not show association with breast cancer risk.
Pubmed
21791674
Original source reporting the Gene Disease association
BeFree
DisGENET score for the Gene Disease association
0.161672697866757
Year of publication
2011
Drugs