ENST00000642807.1 SNRPN

Information
Transcript ID
ENST00000642807.1
Genome
hg38
Position
chr15:24,823,725-24,978,583
Strand
+
CDS length
723
Amino acid length
241
Gene symbol
SNRPN
Gene type
protein-coding
Gene description
small nuclear ribonucleoprotein polypeptide N
Gene Entrez Gene ID
6638
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 24,823,725 24,823,823
2 24,829,798 24,829,905
3 24,886,516 24,886,589
4 24,920,011 24,920,124
5 24,942,275 24,942,462
6 24,962,114 24,962,209
7 24,967,932 24,968,082
8 24,974,311 24,974,456
9 24,975,358 24,975,509
10 24,976,305 24,976,416
11 24,976,877 24,977,029
12 24,977,778 24,977,916
13 24,978,193 24,978,318
14 24,978,407 24,978,583
CDS
Exon number Type Start Stop
8 CDS 24,974,454 24,974,456
9 CDS 24,975,358 24,975,509
10 CDS 24,976,305 24,976,416
11 CDS 24,976,877 24,977,029
12 CDS 24,977,778 24,977,916
13 CDS 24,978,193 24,978,318
14 CDS 24,978,407 24,978,444
Other genome
Genome Chromosome Start End Links
hg19 chr15 25,068,872 25,223,730 Link
CDS sequence
ATGACTGTTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGAATGAGATGTATCCTGCAAGATGGCCGAATCTTCATTGGCACCTTTAAGGCTTTTGACAAGCATATGAATTTGATCCTCTGTGATTGTGATGAGTTCAGAAAGATCAAGCCAAAGAATGCGAAGCAACCAGAGCGTGAAGAAAAGCGGGTTTTGGGTCTGGTGTTGCTGCGTGGGGAGAACTTGGTATCCATGACTGTGGAGGGGCCACCCCCCAAAGATACTGGCATTGCTCGGGTACCACTTGCTGGAGCTGCTGGAGGCCCTGGGGTTGGTAGGGCAGCTGGTAGAGGAGTACCAGCTGGTGTGCCAATTCCCCAGGCCCCTGCTGGATTGGCAGGCCCTGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTAATGACTCCACAGGGAAGAGGCACTGTAGCAGCTGCTGCTGTTGCTGCGACTGCCAGTATTGCTGGAGCCCCAACACAGTACCCACCAGGACGGGGCACTCCGCCCCCACCCGTCGGCAGAGCAACCCCACCTCCAGGCATTATGGCTCCTCCACCTGGTATGAGACCACCCATGGGCCCACCAATTGGGCTTCCCCCTGCTCGAGGGACGCCAATAGGCATGCCGCCTCCGGGAATGAGACCCCCTCCACCAGGCATTAGAGGTCCACCTCCCCCAGGAATGCGTCCACCAAGACCTTAG
Amino sequence
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP*