ENST00000406076.5 CLHC1

Information
Transcript ID
ENST00000406076.5
Genome
hg38
Position
chr2:55,175,669-55,232,563
Strand
-
CDS length
1,395
Amino acid length
465
Gene symbol
CLHC1
Gene type
protein-coding
Gene description
clathrin heavy chain linker domain containing 1
Gene Entrez Gene ID
130162
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 55,175,669 55,175,986
10 55,177,602 55,177,781
9 55,180,510 55,180,712
8 55,181,570 55,181,744
7 55,206,270 55,206,376
6 55,208,626 55,208,710
5 55,209,404 55,209,516
4 55,209,630 55,209,831
3 55,212,673 55,212,806
2 55,217,811 55,217,998
1 55,232,492 55,232,563
CDS
Exon number Type Start Stop
11 CDS 55,175,790 55,175,986
10 CDS 55,177,602 55,177,781
9 CDS 55,180,510 55,180,712
8 CDS 55,181,570 55,181,744
7 CDS 55,206,270 55,206,376
6 CDS 55,208,626 55,208,710
5 CDS 55,209,404 55,209,516
4 CDS 55,209,630 55,209,831
3 CDS 55,212,673 55,212,805
Other genome
Genome Chromosome Start End Links
hg19 chr2 55,402,805 55,459,699 Link
CDS sequence
ATGAGGATTATCGAAAGTAATTCCTCGAAGATTCAATCTCAAATAGATCACATCAAGCAGTGTAGGGCAGAGTATGACACAAAAGAAGTAAAATATTGTACTTTCTCCAAAGATCCTTCAAAACCTATTCCAGGCATGACTCTTCAAGAATCCATGAATCTAGATGCTCTCACTAAATACATGAAACATCTTGAAGATAAATATGCAGAAATTAAACAAGCTATGTTGATAAAATATGTGCCAGCTCAGAGGAAGGCTGATTTAGATGAAGAAATGATTGTGTTATTAAAACGGCGAGATGTAGCTGAAAATCTGAACAAAAAATTGCAGTTTTGTCATCAAAGACTGCAGATAATTTCACAGGCACTTAGTTCATGGGTAAAATCTGATATGAGCAGCCCATTTCAAGACTTTGTGGAGCAAATTCAGAAAACCAAATATTTACAAGGTGACCAAGGCATTGTTGAAGAACTAATGGAAGATGATCCACGCAGGGCAAAAGAAGCTGAAATTATGCTTCACTACATTGAAAGGTTTAATGAGTTAATCTCACTTGGTGAATATGAAAAGGCAGCTTGTTATGCAGCAAACAGTCCTAGAAGAATTCTTCGAAACATTGGTACAATGAATACATTTAAGGCTGTTGGAAAAATTAGAGGAAAGCCTCTTCCATTACTCTTATTTTTTGAGGCCCTCTTTATCACAAGTCATGCTTTTCCATGTCCTGTTGATGCAGCTCTAACCCTGGAAGGAATCAAATGTGGATTATCAGAAAAACGGTTAGATTTAGTTACCAATTGGGTTACACAGGAAAGACTGACATTTTCTGAGGAGGCTGGGGATGTGATTTGTGATTATGGGGAGCAGGATACTTATAACAAGGCCAAGTGCCTGGCTTTAGCTCAGATTGTCTACAGTGAATGTGGCCTGCACAAGAAAGCTATTCTTTGCTTGTGTAAACAGGGTCAGACTCATAGGGTCATGGAGTACATACAGCAGTTGAAGGACTTTACTACCGATGACCTGTTGCAGCTATTAATGTCATGTCCCCAAGTTGAATTAATTCAGTGTCTCACTAAAGAGTTGAATGAGAAACAACCATCTTTATCTTTTGGTCTTGCTATACTTCATCTGTTCTCTGCAGACATGAAAAAAGTTGGCATTAAGCTACTTCAAGAAATCAATAAAGGTGGGATAGATGCAGTAGAAAGTCTTATGATAAATGATTCCTTTTGCTCCATAGAAAAGTGGCAAGAAGTGGCAAATATATGTTCACAGAATGGCTTTGACAAATTATCTAATGACATCACGTCTATTCTTCGATCTCAGGCTGCAGTTACAGAAATTTCTGAAGAGGATGACGCAGTCAACCTAATGGAACATGTGTTTTGGTAG
Amino sequence
MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFNELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFPCPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLALAQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTKELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEVANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW*