ENST00000554227.6 SNRPN

Information
Transcript ID
ENST00000554227.6
Genome
hg38
Position
chr15:24,954,948-24,978,539
Strand
+
CDS length
735
Amino acid length
245
Gene symbol
SNRPN
Gene type
protein-coding
Gene description
small nuclear ribonucleoprotein polypeptide N
Gene Entrez Gene ID
6638
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 24,954,948 24,955,062
2 24,962,114 24,962,209
3 24,967,029 24,967,152
4 24,967,932 24,968,082
5 24,974,311 24,974,456
6 24,974,642 24,974,957
7 24,975,358 24,975,509
8 24,976,305 24,976,416
9 24,976,877 24,977,029
10 24,977,778 24,977,916
11 24,978,193 24,978,318
12 24,978,407 24,978,539
CDS
Exon number Type Start Stop
6 CDS 24,974,943 24,974,957
7 CDS 24,975,358 24,975,509
8 CDS 24,976,305 24,976,416
9 CDS 24,976,877 24,977,029
10 CDS 24,977,778 24,977,916
11 CDS 24,978,193 24,978,318
12 CDS 24,978,407 24,978,444
Other genome
Genome Chromosome Start End Links
hg19 chr15 25,200,095 25,223,686 Link
CDS sequence
ATGATGGACTCTCAGACTGTTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGAATGAGATGTATCCTGCAAGATGGCCGAATCTTCATTGGCACCTTTAAGGCTTTTGACAAGCATATGAATTTGATCCTCTGTGATTGTGATGAGTTCAGAAAGATCAAGCCAAAGAATGCGAAGCAACCAGAGCGTGAAGAAAAGCGGGTTTTGGGTCTGGTGTTGCTGCGTGGGGAGAACTTGGTATCCATGACTGTGGAGGGGCCACCCCCCAAAGATACTGGCATTGCTCGGGTACCACTTGCTGGAGCTGCTGGAGGCCCTGGGGTTGGTAGGGCAGCTGGTAGAGGAGTACCAGCTGGTGTGCCAATTCCCCAGGCCCCTGCTGGATTGGCAGGCCCTGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTAATGACTCCACAGGGAAGAGGCACTGTAGCAGCTGCTGCTGTTGCTGCGACTGCCAGTATTGCTGGAGCCCCAACACAGTACCCACCAGGACGGGGCACTCCGCCCCCACCCGTCGGCAGAGCAACCCCACCTCCAGGCATTATGGCTCCTCCACCTGGTATGAGACCACCCATGGGCCCACCAATTGGGCTTCCCCCTGCTCGAGGGACGCCAATAGGCATGCCGCCTCCGGGAATGAGACCCCCTCCACCAGGCATTAGAGGTCCACCTCCCCCAGGAATGCGTCCACCAAGACCTTAG
Amino sequence
MMDSQTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP*