ENST00000554227.6 SNRPN

Information
Transcript ID
ENST00000554227.6
Genome
hg19
Position
chr15:25,200,095-25,223,686
Strand
+
CDS length
735
Amino acid length
245
Gene symbol
SNRPN
Gene type
protein-coding
Gene description
small nuclear ribonucleoprotein polypeptide N
Gene Entrez Gene ID
6638
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 25,200,095 25,200,209
2 25,207,261 25,207,356
3 25,212,176 25,212,299
4 25,213,079 25,213,229
5 25,219,458 25,219,603
6 25,219,789 25,220,104
7 25,220,505 25,220,656
8 25,221,452 25,221,563
9 25,222,024 25,222,176
10 25,222,925 25,223,063
11 25,223,340 25,223,465
12 25,223,554 25,223,686
CDS
Exon number Type Start Stop
6 CDS 25,220,090 25,220,104
7 CDS 25,220,505 25,220,656
8 CDS 25,221,452 25,221,563
9 CDS 25,222,024 25,222,176
10 CDS 25,222,925 25,223,063
11 CDS 25,223,340 25,223,465
12 CDS 25,223,554 25,223,591
Other genome
Genome Chromosome Start End Links
hg38 chr15 24,954,948 24,978,539 Link
CDS sequence
ATGATGGACTCTCAGACTGTTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGAATGAGATGTATCCTGCAAGATGGCCGAATCTTCATTGGCACCTTTAAGGCTTTTGACAAGCATATGAATTTGATCCTCTGTGATTGTGATGAGTTCAGAAAGATCAAGCCAAAGAATGCGAAGCAACCAGAGCGTGAAGAAAAGCGGGTTTTGGGTCTGGTGTTGCTGCGTGGGGAGAACTTGGTATCCATGACTGTGGAGGGGCCACCCCCCAAAGATACTGGCATTGCTCGGGTACCACTTGCTGGAGCTGCTGGAGGCCCTGGGGTTGGTAGGGCAGCTGGTAGAGGAGTACCAGCTGGTGTGCCAATTCCCCAGGCCCCTGCTGGATTGGCAGGCCCTGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTAATGACTCCACAGGGAAGAGGCACTGTAGCAGCTGCTGCTGTTGCTGCGACTGCCAGTATTGCTGGAGCCCCAACACAGTACCCACCAGGACGGGGCACTCCGCCCCCACCCGTCGGCAGAGCAACCCCACCTCCAGGCATTATGGCTCCTCCACCTGGTATGAGACCACCCATGGGCCCACCAATTGGGCTTCCCCCTGCTCGAGGGACGCCAATAGGCATGCCGCCTCCGGGAATGAGACCCCCTCCACCAGGCATTAGAGGTCCACCTCCCCCAGGAATGCGTCCACCAAGACCTTAG
Amino sequence
MMDSQTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP*